CDS
| Accession Number | TCMCG057C03851 |
| gbkey | CDS |
| Protein Id | XP_018485765.1 |
| Location | join(25323688..25325363,25325448..25325571,25326003..25326296,25326385..25326587,25326843..25327149) |
| Gene | LOC108856456 |
| GeneID | 108856456 |
| Organism | Raphanus sativus |
Protein
| Length | 867aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018630263.1 |
| Definition | PREDICTED: mechanosensitive ion channel protein 4-like [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | M |
| Description | Mechanosensitive channel of small conductance-like |
| KEGG_TC | 1.A.23.4 |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko02000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K22048
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0005215 [VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005886 [VIEW IN EMBL-EBI] GO:0006810 [VIEW IN EMBL-EBI] GO:0006811 [VIEW IN EMBL-EBI] GO:0006820 [VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0008381 [VIEW IN EMBL-EBI] GO:0015267 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0022803 [VIEW IN EMBL-EBI] GO:0022836 [VIEW IN EMBL-EBI] GO:0022857 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0051179 [VIEW IN EMBL-EBI] GO:0051234 [VIEW IN EMBL-EBI] GO:0055085 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGATCATGGCCGTTGATCCGAAGAATGATCGGCATGACTTCATTGTCAAGATCGACGATGAAGAGAATGATCAGTTAATCAACAAAGGCGATGGAGGAAAGTTTTCGAGAGAGTCAAGCTATAACTTCTTGCACGGTGGTGACCAGAAAGTTCAGAAGAGCGGTTATACGCCCCGTGGTGATGATGACTTAGACGACGACGACTACGACGGAGGAGGTTTTGACTTCACGCCGCGGAGAAACGAGCCAGTAGATCCACCGTCAAAGCTCATATACCAGTTTCTCAACAAACAGAAAGCTTCAGGAGATGAGATCACACTCGACATGGAACCCAACATGCCCGAGCTTCAAAGCCACACGGTTTCTCCGTCGGCGACGATGGGTCACGGTAACGAAACTATTGACGCGGTTAGACGGAGACATAACAGAGTCACGTTATCTCCGTCTGTTAAAGATAGTAGTGAAAGTAGCGAAGAAGAAGACAGAGTTGATGAAACAGAGGTTGTGAAGTGCAGCTCGAATAGAACGAACAAGACTTTGATGAAGACCAAGACTAGATCAAGATTGATGGATCCTCCGACCCCGGTTTACCCGGATATGCATTCGGGCCGCCGGACTCCAAAGTCGGGTCATTTGAAATCCGGGAATTTGAAACCCGGGTTTAGCGGGAAAACCGCTAAACCAGGAAATCCAAACCCGGATTTGGAAGAAGAGGAGGATCCGTTCTCTGAGGAGGATTTTCCTGAAGGTTATCAGAAGGATAAGCTCTCTCTTTGGGTTATCTTGGAGTGGATCTTTCTAATTCTGATCATAACCGGTTTGATCTGTAGCCTCGTAGCGATACCTTTCTTGCGCCACAAGGAACTATGGAACCTAGCTTTGTGGAAATGGGAAGTGATGGTTCTTGTCTTGATATGCGGGAGACTTGTGTCGAGTTGGATAGTGAGGATACTCGTGTACTTCGTCGAAAGCAACTTCCTTCTGAGGAAGAAGGTTTTGTATTTCGTCTATGGGATCAGAAAGGCGGTACAGAACTGTCTCTGGCTAGGGCTTGTGTTGATCGCGTGGCATTTCTTGTTCGACAAGAAAGTCCAAAGAGAGACTGGGAGCAACGTGCTTAAGTATGTGAATAAAGTTTTGGTCTGTTTACTCGTTGCTGTTATCATCTGGCTTATAAAGACCTTATTTGTTAAAGTTCTCGCTTCCTCGTTTCATATGAGTACTTACTTTGATCGGATTCAAGAATCTTTGTTTACTCAGTACGTTATTGAAACACTCTCTGGACCTCCTCGTGTGGTTCATGTAGAAGAGGAGATGACTGGAGCTAAGCTATCTCCTCCGGATGGTCCAAAAGTGACCATTGGAAGTGGAAGGATGCAGAAGAGTCCGACCATGATCGGTAAGAGTCAAGCACTTTCGAGGAGTGGTTCCAAGAAAGGAGAGGACGAAGGGATAAGGATAGATCATTTGCAGAGAATGAACACTAAGAACGTGTCGGCTTGGAAAATGAAGAGACTGATGAATGTAATAAGAAAGGGAGCACTTTCTACTTTGGATGAACAGATACAAGACACCTCGACTCACAAAGATGACAAAGCCACACAGATACAAAGTGAGAATGAAGCAAAAAATGCAGCAAGAAAGATTTTTCAGAATGTTGCTATGCCTGGTTCCAGGTACATATATATTGAAGACTTCATGCGTTTTCTTACTGAAGATGAGTCTGAAAGAGCTATGAATCTCTTTGAAGAAGCTTCTGAGAGTGACAAAATCAGTAAATCTTGTCTGAAGAATTGGGTGGTTAATGCCTTCAGAGAACGAAGAGCACTAGCTCTAACCTTAAACGACACAAAAACAGCAGTGAACAGGCTTCACCGAATCATCAACATTTTGGTCAGCATTGTGATCATAATCATATGGCTTCTCATCCTCGGAATCGCTACAACTAAGTTCTTCCTAGTCATAAGCTCTCAGCTTCTTCTTGTAGTCTTTGTGTTTGGAAACTCATGTAAGAACTTGTTTGAAGCTGTCATCTTCGTCTTTGTCAATCATCCATTTGATGTCGGTGACAGGTGTGAAATAGACGGTGTTCAGATGATTGTGGAAGAGATGAACATTTTGACTACGGTGTTTCTTCGATTTGATAATCAGAAGATTGTATACCCTAACAGTCTTCTCGGCAACAAACCTATTGCTAACTATTACCGTAGTCCTGATATGCAAGAGATCGTTGACTTCTTCGTCCATATAGCAACTCCAAGTGAGAAGATAACCGCCTTGAAACAGAGGATACTCAGCTATGTAGATAACAAGAAGGATTATTGGTATCCATCGCCGAGGATAGCATTTAGAGAAATGTGTGGACTGAACAGTATGAAAATCACGATATGGGCAACTCATAAGATGAACCATCATAACATGGGAGAGAGGTTTGTGAGGAGAGGTCAATTACTTGAAGAGATTGGTAGATCCTGCAGAGAAACTGATATCGAATATCGGTTATATCCTCTTAATATCAACATCAAAAGCCTTCCTCCTGCTGCTGCTCCAATCATTTCGGATCGCGTTCCTCTGAGCTGGAACAACCAACAACGCAATGCCTAA |
| Protein: MIMAVDPKNDRHDFIVKIDDEENDQLINKGDGGKFSRESSYNFLHGGDQKVQKSGYTPRGDDDLDDDDYDGGGFDFTPRRNEPVDPPSKLIYQFLNKQKASGDEITLDMEPNMPELQSHTVSPSATMGHGNETIDAVRRRHNRVTLSPSVKDSSESSEEEDRVDETEVVKCSSNRTNKTLMKTKTRSRLMDPPTPVYPDMHSGRRTPKSGHLKSGNLKPGFSGKTAKPGNPNPDLEEEEDPFSEEDFPEGYQKDKLSLWVILEWIFLILIITGLICSLVAIPFLRHKELWNLALWKWEVMVLVLICGRLVSSWIVRILVYFVESNFLLRKKVLYFVYGIRKAVQNCLWLGLVLIAWHFLFDKKVQRETGSNVLKYVNKVLVCLLVAVIIWLIKTLFVKVLASSFHMSTYFDRIQESLFTQYVIETLSGPPRVVHVEEEMTGAKLSPPDGPKVTIGSGRMQKSPTMIGKSQALSRSGSKKGEDEGIRIDHLQRMNTKNVSAWKMKRLMNVIRKGALSTLDEQIQDTSTHKDDKATQIQSENEAKNAARKIFQNVAMPGSRYIYIEDFMRFLTEDESERAMNLFEEASESDKISKSCLKNWVVNAFRERRALALTLNDTKTAVNRLHRIINILVSIVIIIIWLLILGIATTKFFLVISSQLLLVVFVFGNSCKNLFEAVIFVFVNHPFDVGDRCEIDGVQMIVEEMNILTTVFLRFDNQKIVYPNSLLGNKPIANYYRSPDMQEIVDFFVHIATPSEKITALKQRILSYVDNKKDYWYPSPRIAFREMCGLNSMKITIWATHKMNHHNMGERFVRRGQLLEEIGRSCRETDIEYRLYPLNINIKSLPPAAAPIISDRVPLSWNNQQRNA |